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1

Re-prediction of protein-coding genes in the genome of Amsacta moorei entomopoxvirus

Feng-Biao Guo, Xiu-Juan Yu

Journal:

Journal of Virological Methods

Année:

2007

Langue:

english

Fichier:

PDF, 125 KB

english, 2007

2

Identifying bacterial essential genes based on a feature-integrated method

Lin, Yan, Zhang, Fa-Zhan, Xue, Kai, Gao, Yi-Zhou, Guo, Feng-Biao

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 289 KB

english, 2017

3

Accurate prediction of human essential genes using only nucleotide composition and association information

Guo, Feng-Biao, Dong, Chuan, Hua, Hong-Li, Liu, Shuo, Luo, Hao, Zhang, Hong-Wan, Jin, Yan-Ting, Zhang, Kai-Yue

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 283 KB

english, 2017

4

A plot of G + C content against sequence length of 640 bacterial chromosomes shows the points are widely scattered in the upper triangular area

Feng-Biao Guo, Hao Lin, Jian Huang

Journal:

Chromosome Research

Année:

2009

Langue:

english

Fichier:

PDF, 144 KB

english, 2009

5

Prediction of subcellular location of mycobacterial protein using feature selection techniques

Hao Lin, Hui Ding, Feng-Biao Guo, Jian Huang

Journal:

Molecular Diversity

Année:

2010

Langue:

english

Fichier:

PDF, 140 KB

english, 2010

6

ZCURVE_V: a new self-training system for recognizing protein-coding genes in viral and phage genomes

Feng-Biao Guo, Chun-Ting Zhang

Journal:

BMC Bioinformatics

Année:

2006

Langue:

english

Fichier:

PDF, 300 KB

english, 2006

7

Separate base usages of genes located on the leading and lagging strands inChlamydia muridarumrevealed by the Z curve method

Feng-Biao Guo, Xiu-Juan Yu

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 374 KB

english, 2007

8

Base Frequencies at the Second Codon Position of Vibrio cholerae Genes Connect with Protein Function

Ju Wang, Feng-Biao Guo

Journal:

Biochemical and Biophysical Research Communications

Année:

2002

Langue:

english

Fichier:

PDF, 58 KB

english, 2002

9

Chromosome translocation and its consequence in the genome of Burkholderia cenocepacia AU-1054

Feng-Biao Guo, Lu-Wen Ning, Jian Huang, Hao Lin, Hui-Xiong Zhang

Journal:

Biochemical and Biophysical Research Communications

Année:

2010

Langue:

english

Fichier:

PDF, 337 KB

english, 2010

10

GS-Finder: a program to find bacterial gene start sites with a self-training method

Hong-Yu Ou, Feng-Biao Guo, Chun-Ting Zhang

Journal:

The International Journal of Biochemistry & Cell Biology

Année:

2004

Langue:

english

Fichier:

PDF, 725 KB

english, 2004

11

Analysis of nucleotide distribution in the genome of Streptomyces coelicolor A3(2) using the Z curve method

Hong-Yu Ou, Feng-Biao Guo, Chun-Ting Zhang

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 388 KB

english, 2003

12

Relationship between mechanical properties and grain size of AZ80 at 350 °C under different strain rates

Guo-zheng QUAN, Tao SONG, Yi-jun ZHOU, Feng-biao WANG, Jie ZHOU

Journal:

Transactions of Nonferrous Metals Society of China

Année:

2010

Langue:

english

Fichier:

PDF, 686 KB

english, 2010

13

Evaluation of varying ductile fracture criterion for 7075 aluminum alloy

QUAN, Guo-zheng, WANG, Feng-biao, LIU, Ying-ying, SHI, Yu, ZHOU, Jie

Journal:

Transactions of Nonferrous Metals Society of China

Année:

2013

Langue:

english

Fichier:

PDF, 1.55 MB

english, 2013

14

Transcriptional abundance is not the single force driving the evolution of bacterial proteins

Wen Wei, Tao Zhang, Dan Lin, Zu-Jun Yang, Feng-Biao Guo

Journal:

BMC Evolutionary Biology

Année:

2013

Langue:

english

Fichier:

PDF, 614 KB

english, 2013

15

Prediction of Golgi-resident protein types by using feature selection technique

Ding, Hui, Guo, Shou-Hui, Deng, En-Ze, Yuan, Lu-Feng, Guo, Feng-Biao, Huang, Jian, Rao, Nini, Chen, Wei, Lin, Hao

Journal:

Chemometrics and Intelligent Laboratory Systems

Année:

2013

Langue:

english

Fichier:

PDF, 477 KB

english, 2013

16

CEG: a database of essential gene clusters

Yuan-Nong Ye,Zhi-Gang Hua,Jian Huang,Nini Rao,Feng-Biao Guo

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 845 KB

english, 2013

17

The Distribution Patterns of Bases of Protein-coding Genes, Non-coding ORFs, and Intergenic Sequences in Pseudomonas aeruginosa PA01 Genome and its Implications

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2007

Langue:

english

Fichier:

PDF, 1.96 MB

english, 2007

18

Gene Re-annotation in Genome of the Extremophile Pyrobaculum Aerophilum by Using Bioinformatics Methods

Du, Meng-Ze, Guo, Feng-Biao, Chen, Yue-Yun

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2011

Langue:

english

Fichier:

PDF, 360 KB

english, 2011

19

Identify Protein-coding Genes in the Genomes of Aeropyrum pernix K1 and Chlorobium tepidum TLS

Guo, Feng-Biao, Lin, Yan

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2009

Langue:

english

Fichier:

PDF, 596 KB

english, 2009

20

Prediction of protein structural classes based on feature selection technique

Ding, Hui, Lin, Hao, Chen, Wei, Li, Zi-Qiang, Guo, Feng-Biao, Huang, Jian, Rao, Nini

Journal:

Interdisciplinary Sciences: Computational Life Sciences

Année:

2014

Langue:

english

Fichier:

PDF, 144 KB

english, 2014

21

PhD7FASTER: PREDICTING CLONES PROPAGATING FASTER FROM THE Ph.D.-7 PHAGE DISPLAY PEPTIDE LIBRARY

RU, BEIBEI, 'T HOEN, PETER A. C., NIE, FULEI, LIN, HAO, GUO, FENG-BIAO, HUANG, JIAN

Journal:

Journal of Bioinformatics and Computational Biology

Année:

2014

Langue:

english

Fichier:

PDF, 480 KB

english, 2014

22

SAROTUP: Scanner and Reporter of Target-Unrelated Peptides

Huang, Jian, Ru, Beibei, Li, Shiyong, Lin, Hao, Guo, Feng-Biao

Journal:

Journal of Biomedicine and Biotechnology

Année:

2010

Langue:

english

Fichier:

PDF, 711 KB

english, 2010

23

Prediction of Genomic Islands in Three Bacterial Pathogens of Pneumonia

Guo, Feng-Biao, Wei, Wen

Journal:

International Journal of Molecular Sciences

Année:

2012

Langue:

english

Fichier:

PDF, 252 KB

english, 2012

24

PREDICTING SUBCHLOROPLAST LOCATIONS OF PROTEINS BASED ON THE GENERAL FORM OF CHOU'S PSEUDO AMINO ACID COMPOSITION: APPROACHED FROM OPTIMAL TRIPEPTIDE COMPOSITION

LIN, HAO, DING, CHEN, YUAN, LU-FENG, CHEN, WEI, DING, HUI, LI, ZI-QIANG, GUO, FENG-BIAO, HUANG, JIAN, RAO, NI-NI

Journal:

International Journal of Biomathematics

Année:

2013

Langue:

english

Fichier:

PDF, 240 KB

english, 2013

25

BDB: biopanning data bank

He, Bifang, Chai, Guoshi, Duan, Yaocong, Yan, Zhiqiang, Qiu, Liuyang, Zhang, Huixiong, Liu, Zechun, He, Qiang, Han, Ke, Ru, Beibei, Guo, Feng-Biao, Ding, Hui, Lin, Hao, Wang, Xianlong, Rao, Nini, Zhou

Journal:

Nucleic Acids Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.51 MB

english, 2015

26

[IEEE 2015 IEEE China Summit and International Conference on Signal and Information Processing (ChinaSIP) - Chengdu, China (2015.7.12-2015.7.15)] 2015 IEEE China Summit and International Conference on Signal and Information Processing (ChinaSIP) - Applications of four machine learning algorithms in identifying bacterial essential genes based on composition features

Deng, Yan-Yan, Guo, Feng-Biao

Année:

2015

Fichier:

PDF, 446 KB

2015

27

ZCURVE 3.0: identify prokaryotic genes with higher accuracy as well as automatically and accurately select essential genes

Hua, Zhi-Gang, Lin, Yan, Yuan, Ya-Zhou, Yang, De-Chang, Wei, Wen, Guo, Feng-Biao

Journal:

Nucleic Acids Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2015

28

Predicting bacteriophage proteins located in host cell with feature selection technique

Ding, Hui, Liang, Zhi-Yong, Guo, Feng-Biao, Huang, Jian, Chen, Wei, Lin, Hao

Journal:

Computers in Biology and Medicine

Année:

2016

Langue:

english

Fichier:

PDF, 813 KB

english, 2016

29

Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties

Wei, Wen, Gao, Feng, Du, Meng-Ze, Hua, Hong-Li, Wang, Ju, Guo, Feng-Biao

Journal:

Briefings in Bioinformatics

Année:

2016

Fichier:

PDF, 695 KB

2016

30

Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties

Wei, Wen, Gao, Feng, Du, Meng-Ze, Hua, Hong-Li, Wang, Ju, Guo, Feng-Biao

Journal:

Briefings in Bioinformatics

Année:

2016

Langue:

english

Fichier:

PDF, 695 KB

english, 2016

31

Editorial [Hot Topic: Replicating Strand Asymmetry in Bacterial and Eukaryotic Genomes (Guest Editor: Feng-Biao Guo)]

Journal:

Current Genomics

Année:

2012

Langue:

english

Fichier:

PDF, 24 KB

english, 2012

32

ACFIS: a web server for fragment-based drug discovery

Hao, Ge-Fei, Jiang, Wen, Ye, Yuan-Nong, Wu, Feng-Xu, Zhu, Xiao-Lei, Guo, Feng-Biao, Yang, Guang-Fu

Journal:

Nucleic Acids Research

Année:

2016

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2016

33

Predicting Subcellular Localization of Mycobacterial Proteins by Using Chous Pseudo Amino Acid Composition

Lin, Hao, Ding, Hui, Guo, Feng-Biao, Zhang, An-Ying, Huang, Jian

Journal:

Protein & Peptide Letters

Année:

2008

Langue:

english

Fichier:

PDF, 250 KB

english, 2008

34

Identify Golgi Protein Types with Modified Mahalanobis Discriminant Algorithm and Pseudo Amino Acid Composition

Ding, Hui, Liu, Li, Guo, Feng-Biao, Huang, Jian, Lin, Hao

Journal:

Protein & Peptide Letters

Année:

2011

Langue:

english

Fichier:

PDF, 186 KB

english, 2011

35

Combining pseudo dinucleotide composition with the Z curve method to improve the accuracy of predicting DNA elements: a case study in recombination spots

Dong, Chuan, Yuan, Ya-Zhou, Zhang, Fa-Zhan, Hua, Hong-Li, Ye, Yuan-Nong, Labena, Abraham Alemayehu, Lin, Hao, Chen, Wei, Guo, Feng-Biao

Journal:

Molecular BioSystems

Année:

2016

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2016

36

Genomic Complexity Places Less Restrictions on the Evolution of Young Coexpression Networks than Protein–Protein Interactions

Wei, Wen, Jin, Yan-Ting, Du, Meng-Ze, Wang, Ju, Rao, Nini, Guo, Feng-Biao

Journal:

Genome Biology and Evolution

Année:

2016

Langue:

english

Fichier:

PDF, 620 KB

english, 2016

37

A novel proposal of a simplified bacterial gene set and the neo-construction of a general minimized metabolic network

Ye, Yuan-Nong, Ma, Bin-Guang, Dong, Chuan, Zhang, Hong, Chen, Ling-Ling, Guo, Feng-Biao

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2016

38

Laribacter hongkongensis anaerobic adaptation mediated by arginine metabolism is controlled by the cooperation of FNR and ArgR

Xiong, Lifeng, Yang, Ying, Ye, Yuan-Nong, Teng, Jade L. L., Chan, Elaine, Watt, Rory M., Guo, Feng-Biao, Lau, Susanna K. P., Woo, Patrick C. Y.

Journal:

Environmental Microbiology

Année:

2017

Langue:

english

Fichier:

PDF, 1.82 MB

english, 2017

39

MimoDB: a New Repository for Mimotope Data Derived from Phage Display Technology

Ru, Beibei, Huang, Jian, Dai, Ping, Li, Shiyong, Xia, Zhongkui, Ding, Hui, Lin, Hao, Guo, Feng-Biao, Wang, Xianlong

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 656 KB

english, 2010

40

Essentiality drives the orientation bias of bacterial genes in a continuous manner

Zheng, Wen-Xin, Luo, Cheng-Si, Deng, Yan-Yan, Guo, Feng-Biao

Journal:

Scientific Reports

Année:

2015

Langue:

english

Fichier:

PDF, 736 KB

english, 2015

41

The 7th National Conference on Bioinformatics and Systems Biology of China

Zhirong Sun,Kui Hua,Xuegong Zhang,Feng-Biao Guo,Jian Huang

Journal:

Quantitative Biology

Année:

2017

Langue:

english

Fichier:

PDF, 480 KB

english, 2017

42

Anti-CRISPRdb: a comprehensive online resource for anti-CRISPR proteins

Dong, Chuan, Hao, Ge-Fei, Hua, Hong-Li, Liu, Shuo, Labena, Abraham Alemayehu, Chai, Guoshi, Huang, Jian, Rao, Nini, Guo, Feng-Biao

Journal:

Nucleic Acids Research

Année:

2017

Langue:

english

Fichier:

PDF, 3.22 MB

english, 2017

43

Co-adaption of tRNA gene copy number and amino acid usage influences translation rates in three life domains

Du, Meng-Ze, Wei, Wen, Qin, Lei, Liu, Shuo, Zhang, An-Ying, Zhang, Yong, Zhou, Hong, Guo, Feng-Biao

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 870 KB

english, 2017

44

Metabolic pathway databases and model repositories

Labena, Abraham A., Gao, Yi-Zhou, Dong, Chuan, Hua, Hong-li, Guo, Feng-Biao

Journal:

Quantitative Biology

Année:

2018

Langue:

english

Fichier:

PDF, 190 KB

english, 2018

45

Amino acid compositions contribute to the proteins’ evolution under the influence of their abundances and genomic GC content

Du, Meng-Ze, Liu, Shuo, Zeng, Zhi, Alemayehu, Labena Abraham, Wei, Wen, Guo, Feng-Biao

Journal:

Scientific Reports

Année:

2018

Langue:

english

Fichier:

PDF, 2.93 MB

english, 2018

46

Geptop: A Gene Essentiality Prediction Tool for Sequenced Bacterial Genomes Based on Orthology and Phylogeny

Wei, Wen, Ning, Lu-Wen, Ye, Yuan-Nong, Guo, Feng-Biao, Lespinet, Olivier

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2013

47

An Approach for Predicting Essential Genes Using Multiple Homology Mapping and Machine Learning Algorithms

Hua, Hong-Li, Zhang, Fa-Zhan, Labena, Abraham Alemayehu, Dong, Chuan, Jin, Yan-Ting, Guo, Feng-Biao

Journal:

BioMed Research International

Année:

2016

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2016

48

Multiple Factors Drive Replicating Strand Composition Bias in Bacterial Genomes

Zhao, Hai-Long, Xia, Zhong-Kui, Zhang, Fa-Zhan, Ye, Yuan-Nong, Guo, Feng-Biao

Journal:

International Journal of Molecular Sciences

Année:

2015

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2015

49

Phylogenomic Analyses and Reclassification of Species within the Genus Tsukamurella: Insights to Species Definition in the Post-genomic Era

Teng, Jade L. L., Tang, Ying, Huang, Yi, Guo, Feng-Biao, Wei, Wen, Chen, Jonathan H. K., Wong, Samson S. Y., Lau, Susanna K. P., Woo, Patrick C. Y.

Journal:

Frontiers in Microbiology

Année:

2016

Langue:

english

Fichier:

PDF, 2.41 MB

english, 2016

50

iRSpot-Pse6NC: Identifying recombination spots in Saccharomyces cerevisiae by incorporating hexamer composition into general PseKNC

Yang, Hui, Qiu, Wang-Ren, Liu, Guoqing, Guo, Feng-Biao, Chen, Wei, Chou, Kuo-Chen, Lin, Hao

Journal:

International Journal of Biological Sciences

Année:

2018

Langue:

english

Fichier:

PDF, 1.23 MB

english, 2018